STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_2515Cytochrome cbb3 oxidase maturation protein CcoH. (148 aa)    
Predicted Functional Partners:
I595_2510
Putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.999
I595_2512
Cytochrome c class I.
 
 
 0.956
I595_2511
Cytochrome cbb3 oxidase, CcoQ subunit.
 
 
 0.944
I595_2513
Cytochrome c oxidase accessory protein CcoG.
 
  
 0.931
I595_2516
Integral membrane protein.
 
     0.900
I595_2508
Type cbb3 cytochrome oxidase biogenesis protein CcoI Copper-translocating P-type ATPase.
 
   
 0.858
I595_2509
Cytochrome oxidase maturation protein, cbb3-type.
 
  
 0.843
I595_1419
Cytochrome c class I.
 
 
 0.789
I595_2607
Cytochrome c class I.
 
 
 0.755
I595_2603
Cytochrome c class I.
 
 
 0.723
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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