STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_2549Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (458 aa)    
Predicted Functional Partners:
I595_2550
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
       0.773
I595_2604
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
     
 0.589
I595_2551
Pigmentation and extracellular proteinase regulator; Belongs to the DegT/DnrJ/EryC1 family.
       0.548
I595_2552
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.548
I595_839
Bifunctional aspartokinase I/homoserine dehydrogenase I.
  
  0.437
I595_1119
Fructan beta-fructosidase; Belongs to the glycosyl hydrolase 32 family.
     0.431
I595_352
Cytoplasmic trehalase.
  
     0.421
I595_2619
Sugar transporter.
  
     0.410
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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