STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_2734Hypothetical protein. (576 aa)    
Predicted Functional Partners:
I595_3487
Pyrroloquinoline quinone-dependent dehydrogenase.
  
  
  0.831
I595_2735
Putative membrane protein.
       0.773
I595_1190
Putative isopenicillin N epimerase.
  
    0.685
I595_2644
N-acylglucosamine 2-epimerase.
    
   0.667
I595_982
Putative glycogen debranching protein.
  
     0.563
I595_2733
Hypothetical protein.
       0.537
I595_129
Putative outer membrane protein probably involved in nutrient binding.
  
     0.511
I595_2084
Hypothetical protein.
  
    0.507
I595_1311
Gluconolactonase.
  
  
  0.500
I595_3341
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
    
 0.487
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.