STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_2810Putative ABC transporter permease. (799 aa)    
Predicted Functional Partners:
I595_2808
ABC transporter, ATP-binding protein.
 
  0.921
I595_2807
Efflux transporter, MFP component, RND family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.913
I595_2818
ABC transporter, ATP-binding protein.
 
  0.904
I595_2809
Putative lipoprotein.
 
     0.810
I595_2804
Multi-sensor signal transduction histidine kinase.
 
     0.801
I595_2806
Putative outer membrane transport/efflux protein.
 
 
   0.707
lolD
ABC transporter, ATPase component; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   
  0.564
I595_2637
ABC transporter ATP-binding protein YvcR.
   
  0.564
I595_27
ABC transporter related protein.
   
  0.564
I595_2813
Putative ABC transporter, permease protein.
 
   
0.545
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.