STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_3038ATP-dependent transporter SufC. (250 aa)    
Predicted Functional Partners:
I595_3036
Iron-regulated ABC transporter, membrane-spanning permease.
 
 0.999
I595_3039
Iron-sulfur cluster assembly protein SufD.
 
 0.999
I595_3041
Cysteine desulfurase SufS; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.992
I595_3043
FeS assembly SUF system protein.
  
 0.964
I595_1944
Putative aminotransferase.
  
 0.909
I595_3035
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
 
 0.842
I595_3042
Sulfur acceptor protein SufE for iron-sulfur cluster assembly.
 
   0.803
I595_1190
Putative isopenicillin N epimerase.
  
 0.796
I595_3037
AttM/AiiB family protein.
       0.776
I595_3040
Hypothetical protein.
       0.732
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.