STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_3117Asparagine synthetase B. (556 aa)    
Predicted Functional Partners:
I595_839
Bifunctional aspartokinase I/homoserine dehydrogenase I.
 
 
 0.968
I595_3405
Bifunctional aspartokinase I/homoserine dehydrogenase I.
 
 
 0.927
I595_1925
Aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.907
I595_1016
Glutamate synthase.
  
 
 0.906
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.906
I595_1139
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.904
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
   
 
 0.904
I595_2562
L-asparaginase, type I.
     
 0.897
I595_2593
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase.
     
 0.896
I595_1051
Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
     
 0.886
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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