STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_3169Putative glycosyl hydrolase. (476 aa)    
Predicted Functional Partners:
I595_3167
Exo-beta-1,3-glucanase.
 
     0.894
I595_3166
Hypothetical protein.
 
     0.892
I595_3164
Hypothetical protein.
 
  
 0.866
I595_1860
Ribonucleoside-diphosphate reductase, small subunit.
  
  
  0.655
I595_3168
Hypothetical protein.
       0.533
I595_2141
Complex I intermediate-associated protein 30.
  
     0.516
I595_3459
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.507
I595_3159
Two component regulator three Y domain-containing protein.
 
     0.498
I595_3163
Glycoside hydrolase.
 
     0.480
I595_3165
Hypothetical protein.
       0.454
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.