STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_3356Transporter, MFS superfamily. (422 aa)    
Predicted Functional Partners:
I595_3354
Putative cyclase.
 
     0.863
I595_3355
Hypothetical protein.
 
     0.856
I595_3357
NAD(P)-dependent oxidoreductase.
 
    0.851
I595_3353
Tartrate dehydrogenase/decarboxylase.
 
     0.829
I595_3366
Alginate lyase.
 
    0.628
I595_3365
Heparinase II/III family protein.
 
    0.616
I595_3352
Heparan N-sulfatase.
       0.590
I595_3286
Hypothetical protein.
  
     0.544
I595_3363
GntR family transcriptional regulator.
 
   
 0.524
I595_3335
Xylose isomerase domain-containing protein TIM barrel.
 
    0.511
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.