STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_3368Glucuronyl hydrolase. (394 aa)    
Predicted Functional Partners:
I595_3344
Hypothetical protein.
     0.935
I595_3378
Hypothetical protein.
     0.876
I595_3359
Hypothetical protein.
     0.873
I595_3367
Putative beta-glycosidase Glycoside hydrolase, family 2; Belongs to the glycosyl hydrolase 2 family.
  
  0.773
I595_3369
Hypothetical protein.
 
     0.756
I595_3370
TonB-dependent receptor plug.
     0.707
I595_3377
Gluconate-5-dehydrogenase.
 
     0.700
I595_3384
KHG/KDPG aldolase.
 
  
 0.678
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
   
 0.676
I595_3371
Histidine kinase.
 
     0.535
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.