STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_431Restriction endonuclease, type I, EcoRI, R subunit/Type III. (148 aa)    
Predicted Functional Partners:
I595_432
Glycosyl transferase, family 2.
 
     0.861
I595_430
DNA polymerase III, delta subunit.
 
     0.833
I595_582
Hypothetical protein.
  
     0.773
I595_1542
Type I restriction-modification system methyltransferase.
  
 
 0.732
I595_2739
Type I restriction-modification system, M subunit.
  
 
 0.732
I595_3723
Restriction endonuclease BseMII.
  
 
 0.732
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.727
I595_1541
Type I restriction modification DNA specificity domain protein.
  
 
 0.724
I595_2741
Restriction modification system DNA specificity domain.
  
 
 0.724
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
     
 0.718
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.