STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_499NADPH-dependent FMN reductase. (179 aa)    
Predicted Functional Partners:
I595_1989
Flavodoxin/nitric oxide synthase.
     
 0.911
tilS
tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
     
 0.791
I595_496
Protein-disulfide reductase.
       0.777
I595_498
Para-aminobenzoate synthase component I.
       0.773
I595_1844
Beta-lactamase domain protein.
    
 0.671
I595_2517
Metallo-beta-lactamase superfamily protein.
    
 0.671
I595_1274
Hydroxymethylpyrimidine ABC transporter, substrate-binding component.
  
 
  0.606
I595_289
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component.
  
 
  0.606
I595_500
Hypothetical protein.
       0.533
I595_3087
2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain.
  
    0.496
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.