STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_50GCN5-related N-acetyltransferase. (174 aa)    
Predicted Functional Partners:
I595_3005
Putative N-acetyltransferase, GNAT family protein.
 
 
 
  0.788
I595_51
Peptidase M1 family protein.
       0.773
I595_52
Peptidase M28.
       0.709
I595_53
Hypothetical protein.
       0.709
I595_54
Hypothetical protein.
       0.709
I595_55
Hypothetical protein.
       0.709
I595_56
Trehalose-phosphatase.
       0.709
I595_1016
Glutamate synthase.
   
 
 0.705
I595_814
3-deoxy-7-phosphoheptulonate synthase.
    
  0.701
I595_295
2-oxoisovalerate dehydrogenase, E1 subunit.
    
  0.618
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.