STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I602_1359PKD. (440 aa)    
Predicted Functional Partners:
I602_1358
Regulatory P domain of the subtilisin-like proprotein convertases and other protease.
 
  
  0.957
I602_1360
Hypothetical protein.
 
     0.948
I602_1361
Di-hem cytochrome c peroxidase.
 
     0.851
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.561
I602_1771
Hypothetical protein.
  
   0.549
I602_1364
Metallo-beta-lactamase superfamily protein.
 
     0.529
I602_1555
Hypothetical protein.
  
   0.503
I602_2611
Hypothetical protein.
  
   0.464
I602_726
TonB dependent/ligand-gated channel.
  
 
   0.454
I602_1733
DUF4289 domain containing protein.
  
 
   0.438
Your Current Organism:
Polaribacter dokdonensis
NCBI taxonomy Id: 1300348
Other names: P. dokdonensis DSW-5, Polaribacter dokdonensis DSW-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.