STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Z948_1064Nitroreductase family protein. (190 aa)    
Predicted Functional Partners:
Z948_1065
Membrane protein.
  
    0.895
Z948_1063
Histone deacetylase family protein.
  
    0.790
Z948_1062
Hypothetical protein.
       0.732
Z948_2252
ABC-2 type transporter.
  
  
 0.657
Z948_2205
Uroporphyrin-III C-methyltransferase domain protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
    
 0.619
Z948_262
Uroporphyrin-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
    
 0.619
Z948_2520
Reductive dehalogenase.
  
  
 0.530
trpS
Tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.511
Z948_2174
Sensor histidine kinase.
  
   
 0.496
Z948_2431
Thioesterase-like protein.
   
    0.483
Your Current Organism:
Sulfitobacter donghicola
NCBI taxonomy Id: 1300350
Other names: S. donghicola DSW-25 = KCTC 12864 = JCM 14565, Sulfitobacter donghicola DSW-25, Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565, Sulfitobacter donghicola JCM 14565, Sulfitobacter donghicola KCTC 12864
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