Gasu_63510 protein (Galdieria sulphuraria) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Gasu_63510

Deoxyhypusine synthase. (353 aa)

Predicted Functional Partners:

Gasu_17370

0.989

Gasu_39590

0.922

Gasu_14920

0.808

Gasu_66130

0.675

Gasu_03410

0.598

Gasu_01970

0.571

Gasu_14160

0.521

Gasu_30780

0.504

Gasu_50360

0.503

Gasu_53010

0.483

Your Current Organism:

Galdieria sulphuraria

NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gasu_01970	Gasu_03410	M2YAF1	M2Y9L6	S-adenosylmethionine decarboxylase isoform 1.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.471
Gasu_01970	Gasu_14920	M2YAF1	M2W664	S-adenosylmethionine decarboxylase isoform 1.	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	0.554
Gasu_01970	Gasu_17370	M2YAF1	M2Y544	S-adenosylmethionine decarboxylase isoform 1.	Eukaryotic translation initiation factor 5A.	0.560
Gasu_01970	Gasu_30780	M2YAF1	M2XHS3	S-adenosylmethionine decarboxylase isoform 1.	Argininosuccinate synthase.	0.555
Gasu_01970	Gasu_39590	M2YAF1	M2XF06	S-adenosylmethionine decarboxylase isoform 1.	Elongation factor EF-P.	0.480
Gasu_01970	Gasu_63510	M2YAF1	M2VS95	S-adenosylmethionine decarboxylase isoform 1.	Deoxyhypusine synthase.	0.571
Gasu_03410	Gasu_01970	M2Y9L6	M2YAF1	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	S-adenosylmethionine decarboxylase isoform 1.	0.471
Gasu_03410	Gasu_14160	M2Y9L6	M2Y6I4	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	Phenylalanyl-tRNA synthetase alpha chain.	0.567
Gasu_03410	Gasu_14920	M2Y9L6	M2W664	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	0.456
Gasu_03410	Gasu_53010	M2Y9L6	M2WT53	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.621
Gasu_03410	Gasu_63510	M2Y9L6	M2VS95	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	Deoxyhypusine synthase.	0.598
Gasu_14160	Gasu_03410	M2Y6I4	M2Y9L6	Phenylalanyl-tRNA synthetase alpha chain.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.567
Gasu_14160	Gasu_17370	M2Y6I4	M2Y544	Phenylalanyl-tRNA synthetase alpha chain.	Eukaryotic translation initiation factor 5A.	0.478
Gasu_14160	Gasu_39590	M2Y6I4	M2XF06	Phenylalanyl-tRNA synthetase alpha chain.	Elongation factor EF-P.	0.478
Gasu_14160	Gasu_63510	M2Y6I4	M2VS95	Phenylalanyl-tRNA synthetase alpha chain.	Deoxyhypusine synthase.	0.521
Gasu_14920	Gasu_01970	M2W664	M2YAF1	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	S-adenosylmethionine decarboxylase isoform 1.	0.554
Gasu_14920	Gasu_03410	M2W664	M2Y9L6	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.456
Gasu_14920	Gasu_17370	M2W664	M2Y544	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	Eukaryotic translation initiation factor 5A.	0.969
Gasu_14920	Gasu_39590	M2W664	M2XF06	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	Elongation factor EF-P.	0.885
Gasu_14920	Gasu_63510	M2W664	M2VS95	Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.	Deoxyhypusine synthase.	0.808