STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_60410DNA binding / transcription factor. (734 aa)    
Predicted Functional Partners:
Gasu_57000
Nuclear cap-binding protein subunit 2.
    
 0.994
Gasu_52090
Nuclear cap-binding protein subunit 1.
   
 0.993
Gasu_41650
ATP-dependent RNA helicase.
   
 0.922
Gasu_04240
ATP-dependent RNA helicase.
   
 0.900
Gasu_42960
RRM domain-containing protein.
   
 0.900
Gasu_24340
MI domain-containing protein.
   
 
  0.861
Gasu_22090
Pre-mRNA-splicing factor ATP-dependent RNA helicase.
   
 0.844
Gasu_09310
Splicing factor PWI domain-containing protein.
   
 
  0.839
Gasu_27450
Peptidyl-prolyl cis-trans isomerase-like protein.
   
 
  0.838
Gasu_50780
Peptidyl-prolyl cis-trans isomerase B (Cyclophilin B).
   
 
  0.838
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.