STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_59160CTD small phosphatase like isoform 1. (490 aa)    
Predicted Functional Partners:
Gasu_06620
Lipin family protein.
    
 0.599
Gasu_57670
Mitochondrial protein translocase, MPT family.
    
 0.547
Gasu_55820
DNA-directed RNA polymerase II subunit G.
    
 0.536
Gasu_02440
DNA-directed RNA polymerase II subunit D.
    
 0.532
Gasu_56650
Transcription initiation factor IIF beta subunit (TFIIF-beta) family protein.
   
 0.526
Gasu_39630
Transcription elongation factor SPT5.
    
 0.497
Gasu_16990
Mitochondrial protein translocase, MPT family.
   
 0.496
Gasu_47150
DNA-directed RNA Polymerase II subunit F.
   
 0.484
Gasu_34130
DNA-directed RNA polymerase II subunit E.
   
  0.484
Gasu_24140
DNA-directed RNA Polymerase II subunit L.
   
  0.463
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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