STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_56480Nuclear pore protein. (890 aa)    
Predicted Functional Partners:
Gasu_53070
Nucleocytoplasmic transporter.
   
 0.999
Gasu_20890
Nucleoporin P54.
  
 0.999
Gasu_53080
E3 SUMO-protein ligase RanBP2.
   
 0.999
Gasu_28270
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.998
Gasu_36350
Transducin family protein / WD-40 repeat family protein; Belongs to the WD repeat SEC13 family.
   
 0.996
Gasu_06550
Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family.
   
 0.996
Gasu_35190
Uncharacterized protein.
    
 0.996
Gasu_27720
Transducin family protein / WD-40 repeat family protein; Belongs to the WD repeat SEC13 family.
    
 0.993
Gasu_03300
RRM Nup35-type domain-containing protein.
   
 0.993
Gasu_54190
Uncharacterized protein.
   
 0.980
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.