STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_56580Uncharacterized protein. (723 aa)    
Predicted Functional Partners:
Gasu_52010
Chromatin remodeling complex / DNA-dep ATPase.
    
 0.724
Gasu_38440
Chromatin remodeling complex / DNA-dep ATPase.
    
 0.724
Gasu_19670
Uncharacterized protein.
    
 0.724
Gasu_46380
Splicing factor 3B subunit 1.
   
 0.660
Gasu_27390
DNA polymerase phi subunit.
    
 0.618
Gasu_28100
Chromatin remodeling complex / DNA-dep ATPase.
    
 0.566
Gasu_36550
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.545
Gasu_35830
Histone acetyltransferase.
   
 0.506
Gasu_37960
DNA-directed RNA polymerase I subunit A49 isoform 1.
    
 0.474
Gasu_47150
DNA-directed RNA Polymerase II subunit F.
     
 0.469
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.