STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_54240Glutamine amidotransferase. (203 aa)    
Predicted Functional Partners:
Gasu_12160
Pyridoxine biosynthesis protein; Belongs to the PdxS/SNZ family.
 0.999
Gasu_43940
GDSL-motif lipase/hydrolase family protein.
  
 
 0.979
Gasu_00430
Pyridoxamine 5'-phosphate oxidase isoform 1.
    
 0.966
Gasu_24580
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
    
  0.833
Gasu_55180
Transketolase.
     
  0.800
Gasu_20090
Transketolase.
     
  0.800
Gasu_51780
Ribose 5-phosphate isomerase.
     
  0.800
Gasu_37650
Ribose 5-phosphate isomerase.
     
  0.800
Gasu_46280
Phosphoglucomutase.
     
  0.800
Gasu_28550
Phosphoglucomutase.
     
  0.800
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.