STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_50620ABC transporter, subfamily B, ATP-binding & transmembrane domain. (632 aa)    
Predicted Functional Partners:
Gasu_45420
ABC transporter, subfamily B, ATP-binding & transmembrane domain.
  
 
0.566
Gasu_18250
ABC transporter, subfamily B, ATP-binding & transmembrane domain.
  
 
0.558
Gasu_53250
Protoheme IX farnesyltransferase.
 
    
 0.458
Gasu_60610
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
 
 
 0.452
Gasu_29880
ABC transporter, subfamily B, ATP-binding & transmembrane domain isoform 2.
  
0.449
Gasu_03410
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.430
Gasu_42810
Bifunctional polynucleotide phosphatase/kinase.
  
 
 0.426
Gasu_57030
Glycerophosphoryl diester phosphodiesterase family protein isoform 1.
   
 0.414
Gasu_28620
Ubiquitin carboxyl-terminal hydrolase.
    
  0.401
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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