Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gasu_11630 | Gasu_21960 | M2X4U9 | M2Y3X4 | Light-harvesting complex protein. | NADH dehydrogenase (Ubiquinone) Fe-S protein 7; Belongs to the complex I 20 kDa subunit family. | 0.433 |
Gasu_11630 | Gasu_42970 | M2X4U9 | M2XWX3 | Light-harvesting complex protein. | Photosystem I subunit O. | 0.670 |
Gasu_11630 | Gasu_50670 | M2X4U9 | M2VVU8 | Light-harvesting complex protein. | Phosphatase / phosphoprotein phosphatase / protein tyrosine phosphatase. | 0.473 |
Gasu_11630 | Gasu_58510 | M2X4U9 | M2X9K5 | Light-harvesting complex protein. | Rab-GAP TBC domain-containing protein. | 0.406 |
Gasu_11630 | PsaA | M2X4U9 | M2WWW9 | Light-harvesting complex protein. | [pt] photosystem I P700 chlorophyll A apoprotein. | 0.548 |
Gasu_11630 | psaB | M2X4U9 | E3UIU1 | Light-harvesting complex protein. | Photosystem I P700 chlorophyll a apoprotein A2; Belongs to the PsaA/PsaB family. | 0.548 |
Gasu_11630 | psaD | M2X4U9 | E3UIU3 | Light-harvesting complex protein. | [pt] photosystem I subunit II. | 0.717 |
Gasu_11630 | psaF | M2X4U9 | E3UIU5 | Light-harvesting complex protein. | [pt] photosystem I subunit III. | 0.713 |
Gasu_21960 | Gasu_11630 | M2Y3X4 | M2X4U9 | NADH dehydrogenase (Ubiquinone) Fe-S protein 7; Belongs to the complex I 20 kDa subunit family. | Light-harvesting complex protein. | 0.433 |
Gasu_21960 | Gasu_37550 | M2Y3X4 | M2VZV1 | NADH dehydrogenase (Ubiquinone) Fe-S protein 7; Belongs to the complex I 20 kDa subunit family. | Light-harvesting complex protein. | 0.433 |
Gasu_21960 | Gasu_50670 | M2Y3X4 | M2VVU8 | NADH dehydrogenase (Ubiquinone) Fe-S protein 7; Belongs to the complex I 20 kDa subunit family. | Phosphatase / phosphoprotein phosphatase / protein tyrosine phosphatase. | 0.479 |
Gasu_21960 | Gasu_58900 | M2Y3X4 | M2X9H6 | NADH dehydrogenase (Ubiquinone) Fe-S protein 7; Belongs to the complex I 20 kDa subunit family. | Rab family, other. | 0.433 |
Gasu_21960 | PsaA | M2Y3X4 | M2WWW9 | NADH dehydrogenase (Ubiquinone) Fe-S protein 7; Belongs to the complex I 20 kDa subunit family. | [pt] photosystem I P700 chlorophyll A apoprotein. | 0.641 |
Gasu_21960 | psaB | M2Y3X4 | E3UIU1 | NADH dehydrogenase (Ubiquinone) Fe-S protein 7; Belongs to the complex I 20 kDa subunit family. | Photosystem I P700 chlorophyll a apoprotein A2; Belongs to the PsaA/PsaB family. | 0.640 |
Gasu_21960 | psaD | M2Y3X4 | E3UIU3 | NADH dehydrogenase (Ubiquinone) Fe-S protein 7; Belongs to the complex I 20 kDa subunit family. | [pt] photosystem I subunit II. | 0.726 |
Gasu_21960 | psaF | M2Y3X4 | E3UIU5 | NADH dehydrogenase (Ubiquinone) Fe-S protein 7; Belongs to the complex I 20 kDa subunit family. | [pt] photosystem I subunit III. | 0.754 |
Gasu_37550 | Gasu_21960 | M2VZV1 | M2Y3X4 | Light-harvesting complex protein. | NADH dehydrogenase (Ubiquinone) Fe-S protein 7; Belongs to the complex I 20 kDa subunit family. | 0.433 |
Gasu_37550 | Gasu_42970 | M2VZV1 | M2XWX3 | Light-harvesting complex protein. | Photosystem I subunit O. | 0.670 |
Gasu_37550 | Gasu_50670 | M2VZV1 | M2VVU8 | Light-harvesting complex protein. | Phosphatase / phosphoprotein phosphatase / protein tyrosine phosphatase. | 0.473 |
Gasu_37550 | Gasu_58510 | M2VZV1 | M2X9K5 | Light-harvesting complex protein. | Rab-GAP TBC domain-containing protein. | 0.406 |
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