Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gasu_03980 | Gasu_48570 | M2Y8B4 | M2VWE2 | 4-hydroxybenzoate polyprenyltransferase. | Monothiol glutaredoxin. | 0.846 |
Gasu_04670 | Gasu_48570 | M2Y8K1 | M2VWE2 | Uncharacterized protein; Belongs to the BolA/IbaG family. | Monothiol glutaredoxin. | 0.609 |
Gasu_04670 | Gasu_53340 | M2Y8K1 | M2XUL8 | Uncharacterized protein; Belongs to the BolA/IbaG family. | Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the cytosolic Fe-S scaffold complex. Electrons are transferred from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Together with the diflavin oxidoreductase, also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RN [...] | 0.682 |
Gasu_10930 | Gasu_17540 | M2Y796 | M2XLE5 | Glutaredoxin. | Uncharacterized protein. | 0.430 |
Gasu_10930 | Gasu_26240 | M2Y796 | M2XIV8 | Glutaredoxin. | Iron-sulfur protein ISA2-like protein. | 0.430 |
Gasu_10930 | Gasu_48570 | M2Y796 | M2VWE2 | Glutaredoxin. | Monothiol glutaredoxin. | 0.484 |
Gasu_10930 | Gasu_63080 | M2Y796 | M2XRH0 | Glutaredoxin. | Iron-sulfur cluster assembly accessory protein. | 0.429 |
Gasu_10930 | ycf83 | M2Y796 | M2VSC4 | Glutaredoxin. | [pt] iron-sulfur cluster assembly protein IscA (Plastid). | 0.429 |
Gasu_17540 | Gasu_10930 | M2XLE5 | M2Y796 | Uncharacterized protein. | Glutaredoxin. | 0.430 |
Gasu_17540 | Gasu_28650 | M2XLE5 | M2W2G4 | Uncharacterized protein. | Molecular chaperone HscB. | 0.677 |
Gasu_17540 | Gasu_48570 | M2XLE5 | M2VWE2 | Uncharacterized protein. | Monothiol glutaredoxin. | 0.479 |
Gasu_17540 | Gasu_63080 | M2XLE5 | M2XRH0 | Uncharacterized protein. | Iron-sulfur cluster assembly accessory protein. | 0.682 |
Gasu_17540 | ycf83 | M2XLE5 | M2VSC4 | Uncharacterized protein. | [pt] iron-sulfur cluster assembly protein IscA (Plastid). | 0.682 |
Gasu_26240 | Gasu_10930 | M2XIV8 | M2Y796 | Iron-sulfur protein ISA2-like protein. | Glutaredoxin. | 0.430 |
Gasu_26240 | Gasu_28650 | M2XIV8 | M2W2G4 | Iron-sulfur protein ISA2-like protein. | Molecular chaperone HscB. | 0.677 |
Gasu_26240 | Gasu_48570 | M2XIV8 | M2VWE2 | Iron-sulfur protein ISA2-like protein. | Monothiol glutaredoxin. | 0.479 |
Gasu_26240 | Gasu_63080 | M2XIV8 | M2XRH0 | Iron-sulfur protein ISA2-like protein. | Iron-sulfur cluster assembly accessory protein. | 0.725 |
Gasu_26240 | ycf83 | M2XIV8 | M2VSC4 | Iron-sulfur protein ISA2-like protein. | [pt] iron-sulfur cluster assembly protein IscA (Plastid). | 0.722 |
Gasu_28650 | Gasu_17540 | M2W2G4 | M2XLE5 | Molecular chaperone HscB. | Uncharacterized protein. | 0.677 |
Gasu_28650 | Gasu_26240 | M2W2G4 | M2XIV8 | Molecular chaperone HscB. | Iron-sulfur protein ISA2-like protein. | 0.677 |
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