STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_45240Bifunctional 2-dehydro-3-deoxyphosphogluconate aldolase /4-hydroxy-2-oxoglutarate aldolase. (205 aa)    
Predicted Functional Partners:
Gasu_58040
Ubiquitin.
    
 0.806
Gasu_54690
RAN GTPase-activating protein 1.
   
 
 0.617
Gasu_22390
Serine/threonine protein kinase, aurora kinase; Belongs to the protein kinase superfamily.
   
 0.587
Gasu_20440
Serine/threonine protein kinase, aurora kinase; Belongs to the protein kinase superfamily.
   
 0.587
Gasu_00160
Serine/threonine protein kinase, aurora kinase; Belongs to the protein kinase superfamily.
   
 0.587
Gasu_06430
Oxysterol-binding protein-like protein.
    
 0.552
Gasu_53520
NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex 5.
    
 
 0.481
Gasu_26740
Probable methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).
    
 0.474
Gasu_42050
NADH dehydrogenase (Ubiquinone) Fe-S protein 8.
   
   0.452
Gasu_27220
NADH dehydrogenase (Ubiquinone) Fe-S protein 2; Belongs to the complex I 49 kDa subunit family.
   
   0.444
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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