STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_43690Recombination protein RecA; Belongs to the RecA family. (396 aa)    
Predicted Functional Partners:
Gasu_08480
ATP-dependent RNA helicase-like protein.
   
 0.998
Gasu_02580
DNA repair protein isoform 1; Belongs to the RecA family.
   
 0.933
Gasu_21050
Breast cancer 2 susceptibility protein.
   
 0.930
Gasu_60930
Replication protein A subunit.
  
 0.896
Gasu_31840
DNA-repair protein XRCC3.
    
 0.889
Gasu_26690
DNA repair and recombination protein RAD52.
    
 0.874
Gasu_48760
DNA helicase II / ATP-dependent DNA helicase PcrA.
  
 
 0.857
Gasu_33170
Uncharacterized protein.
   
 0.851
Gasu_54170
Exonuclease 1.
  
 0.847
Gasu_19150
Crossover junction endonuclease MUS81 isoform 2.
   
 0.832
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.