STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_42850Peptidylprolyl isomerase. (383 aa)    
Predicted Functional Partners:
Gasu_02210
SKIP_SNW domain-containing protein.
    
 0.627
Gasu_12780
Nucleotide binding / ubiquitin-protein ligase.
    
 0.622
Gasu_49490
Pre-mRNA-splicing factor SYF1.
    
 0.613
Gasu_29350
Uncharacterized protein.
 
 
 0.600
Gasu_56080
G10 family protein.
    
  0.579
Gasu_44880
Hydrolase.
  
  
 0.574
Gasu_27660
Transducin family protein / WD-40 repeat family protein.
    
 0.568
Gasu_18980
Uncharacterized protein.
  
 
  0.565
Gasu_31480
Crooked neck protein, putative.
   
 0.558
Gasu_30740
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.535
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.