STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_41580Methyltransferase. (267 aa)    
Predicted Functional Partners:
Gasu_20870
Uncharacterized protein.
   
 0.997
Gasu_56110
Uncharacterized protein.
   
 0.975
Gasu_03670
Uncharacterized protein.
   
 0.970
Gasu_07210
RNA-binding protein NOB1 isoform 2.
   
 0.954
Gasu_52570
40S ribosomal protein S13e; Belongs to the universal ribosomal protein uS15 family.
    
  0.952
Gasu_23220
RNA-binding protein PNO1.
   
 0.951
Gasu_34220
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.939
Gasu_18810
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.938
Gasu_18730
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.938
Gasu_61400
40S ribosomal protein S11e; Belongs to the universal ribosomal protein uS17 family.
   
  0.929
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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