STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cemAChloroplast envelope membrane protein; May be involved in proton extrusion. Indirectly promotes efficient inorganic carbon uptake. (278 aa)    
Predicted Functional Partners:
psaD
[pt] photosystem I subunit II.
  
   
 0.732
Gasu_40680
[pt] photosystem I assembly protein.
   
  
 0.684
ilvB
Acetolactate synthase.
      
 0.643
ccsA
Cytochrome c biogenesis protein CcsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
   
  
 0.637
Gasu_57480
NADH dehydrogenase (Ubiquinone) Fe-S protein 3; Belongs to the complex I 30 kDa subunit family.
   
  
 0.600
clpC
[pt] ATP-dependent Clp protease ATP-binding subunit ClpB; Belongs to the ClpA/ClpB family.
      
 0.585
Gasu_40610
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
   
  
 0.577
Gasu_25250
Translation initiation factor IF-1.
      
 0.537
Gasu_21960
NADH dehydrogenase (Ubiquinone) Fe-S protein 7; Belongs to the complex I 20 kDa subunit family.
   
  
 0.526
Gasu_42050
NADH dehydrogenase (Ubiquinone) Fe-S protein 8.
   
  
 0.521
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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