STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_36860Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1074 aa)    
Predicted Functional Partners:
Gasu_30740
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.984
Gasu_19620
Methionyl-tRNA synthetase isoform 2; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.667
Gasu_17440
Methionine--tRNA ligase-like protein.
   
 
 0.667
Gasu_52090
Nuclear cap-binding protein subunit 1.
   
  
 0.547
Gasu_53080
E3 SUMO-protein ligase RanBP2.
   
 0.532
Gasu_14650
Exportin 1 (Xpo1).
   
 
 0.477
Gasu_12150
Initiator tRNA phosphoribosyl transferase family protein.
   
 
 0.471
Gasu_23070
Importin N-terminal domain-containing protein.
   
  
 0.456
Gasu_02720
Protein transporter.
   
  
 0.448
Gasu_38160
Uncharacterized protein.
   
  
 0.438
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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