STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_37550Light-harvesting complex protein. (297 aa)    
Predicted Functional Partners:
Gasu_28800
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.858
Gasu_21530
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.848
Gasu_14400
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.839
Gasu_14580
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.836
Gasu_44350
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.828
Gasu_08830
Uncharacterized protein.
    
 0.827
Gasu_34560
Uncharacterized protein.
    
 0.824
psbO
Chloroplast photosystem II 33 kDa.
  
 
 0.817
Gasu_07800
Uncharacterized protein.
   
 0.749
psaD
[pt] photosystem I subunit II.
   
 
 0.717
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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