STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_34780Uncharacterized protein. (278 aa)    
Predicted Functional Partners:
Gasu_56460
Pre-mRNA-splicing factor CDC5/CEF1.
    
 
 0.995
Gasu_12780
Nucleotide binding / ubiquitin-protein ligase.
    
   0.992
Gasu_53560
Peptidyl-prolyl cis-trans isomerase B (Cyclophilin B).
   
 0.991
Gasu_24340
MI domain-containing protein.
    
 0.990
Gasu_34140
Pre-mRNA-splicing factor ATP-dependent RNA helicase.
    
 0.989
Gasu_59050
Splicing factor 3B subunit 2.
    
 
 0.976
Gasu_27660
Transducin family protein / WD-40 repeat family protein.
    
 0.969
Gasu_38900
Splicing factor 3A subunit 2.
    
 
 0.958
Gasu_56080
G10 family protein.
    
 
 0.947
Gasu_46380
Splicing factor 3B subunit 1.
    
 
 0.945
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.