STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_34170Ubiquitin carboxyl-terminal hydrolase 48; Belongs to the peptidase C19 family. (1050 aa)    
Predicted Functional Partners:
Gasu_31280
E3 ubiquitin-protein ligase TRIP12.
   
 
 0.794
Gasu_10140
Ubiquitin.
    
 0.752
Gasu_49630
40S ribosomal protein S27Ae.
   
 0.657
Gasu_66020
Ubiquitin-like domain-containing protein.
   
 0.657
Gasu_17740
PI3K/PI4K domain-containing protein.
   
 0.614
Gasu_52970
Ubiquitin.
   
 0.613
Gasu_13790
Ubiquitin.
   
 0.613
Gasu_61140
Ubiquitin carboxyl-terminal hydrolase 5/13.
   
 
 0.577
Gasu_51560
GMP synthase (Glutamine-hydrolysing).
   
 
 0.553
Gasu_12640
Nucleotide excision repair protein.
   
 0.510
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.