STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_29790Uncharacterized protein. (180 aa)    
Predicted Functional Partners:
Gasu_02580
DNA repair protein isoform 1; Belongs to the RecA family.
    
 
 0.518
Gasu_55610
Translocation protein, Sec family; Belongs to the SecY/SEC61-alpha family.
    
 
 0.500
Gasu_62960
Nucleotide-sugar transporter, DMT family.
   
 
 0.472
Gasu_31840
DNA-repair protein XRCC3.
    
 
 0.459
Gasu_43690
Recombination protein RecA; Belongs to the RecA family.
    
 
 0.427
Gasu_42740
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
    
 
 0.427
Gasu_22490
Uncharacterized protein.
    
 
 0.407
Gasu_43300
Uncharacterized protein.
      
 0.403
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.