STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_28990Seryl-tRNA synthetase. (512 aa)    
Predicted Functional Partners:
Gasu_43110
Uncharacterized protein.
     
 0.934
Gasu_58440
Seryl-tRNA synthetase.
  
  
 
0.909
Gasu_49350
Small GTP-binding protein of Ras family.
 
      0.819
Gasu_07730
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.780
Gasu_37740
Small GTP-binding protein of Ras family.
 
      0.723
Gasu_19070
Glycyl-tRNA synthetase.
   
  
 0.719
Gasu_19620
Methionyl-tRNA synthetase isoform 2; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.716
Gasu_17440
Methionine--tRNA ligase-like protein.
  
  
 0.716
Gasu_40420
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.672
Gasu_17290
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.672
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.