STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_29490ATP-dependent RNA helicase. (927 aa)    
Predicted Functional Partners:
Gasu_08270
Exosome complex component RRP42.
   
 0.809
Gasu_53080
E3 SUMO-protein ligase RanBP2.
   
 0.802
Gasu_42580
Exosome complex component CSL4.
   
 0.801
Gasu_35970
Exosome complex component RRP4.
   
 0.800
Gasu_22330
Exosome complex component RRP45.
    
 0.800
Gasu_39660
Exosome complex component RRP4.
   
 0.795
Gasu_19420
Exosome complex exonuclease RRP6.
   
 0.794
Gasu_18320
Exosome complex component RRP43.
   
 0.790
Gasu_18400
Uncharacterized protein.
   
 0.720
Gasu_46100
WD repeat-containing protein 61.
    
 0.715
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.