STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_27980Ornithine aminotransferase. (434 aa)    
Predicted Functional Partners:
Gasu_37950
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.952
Gasu_37310
Glutamate 5-kinase isoform 1.
   
 0.948
Gasu_55350
Glutamate 5-kinase.
   
 0.948
Gasu_54820
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.928
Gasu_24360
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.928
Gasu_00120
Ornithine carbamoyltransferase isoform 1; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
 
 0.917
Gasu_09530
Biotin synthetase.
 
  
 0.913
Gasu_30780
Argininosuccinate synthase.
  
 
 0.852
Gasu_05180
Argininosuccinate lyase.
  
  
 0.846
Gasu_25400
N-acetyl-gamma-glutamyl-phosphate reductase.
  
  
 0.823
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.