STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_27350Protein-S-isoprenylcysteine O-methyltransferase. (282 aa)    
Predicted Functional Partners:
Gasu_37740
Small GTP-binding protein of Ras family.
    
 0.631
Gasu_49350
Small GTP-binding protein of Ras family.
    
 0.631
Gasu_06680
Prenyl protein peptidase.
   
 0.628
Gasu_33610
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 
 0.580
Gasu_19270
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
      
 0.560
Gasu_14150
Farnesyltransferase / geranylgeranyltransferase isoform 1.
      
 0.560
Gasu_55560
C-CAP/cofactor C-like domain-containing protein.
      
 0.485
Gasu_21630
GINS complex subunit 1.
      
 0.463
Gasu_28890
2-oxoisovalerate dehydrogenase E1 component, beta subunit.
      
 0.457
Gasu_10170
Insulysin; Belongs to the peptidase M16 family.
      
 0.456
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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