Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gasu_08750 | Gasu_20430 | M2W7K1 | M2W498 | Soluble NSF attachment protein. | AAA-type ATPase; Belongs to the AAA ATPase family. | 0.628 |
Gasu_19810 | Gasu_20430 | M2XKS8 | M2W498 | Nuclear import protein NPL4-like protein. | AAA-type ATPase; Belongs to the AAA ATPase family. | 0.633 |
Gasu_19810 | Gasu_43460 | M2XKS8 | M2VY02 | Nuclear import protein NPL4-like protein. | Ubiquitin fusion degradation protein. | 0.999 |
Gasu_19810 | Gasu_53780 | M2XKS8 | M2XTQ1 | Nuclear import protein NPL4-like protein. | UBX domain-containing protein. | 0.999 |
Gasu_20430 | Gasu_08750 | M2W498 | M2W7K1 | AAA-type ATPase; Belongs to the AAA ATPase family. | Soluble NSF attachment protein. | 0.628 |
Gasu_20430 | Gasu_19810 | M2W498 | M2XKS8 | AAA-type ATPase; Belongs to the AAA ATPase family. | Nuclear import protein NPL4-like protein. | 0.633 |
Gasu_20430 | Gasu_31320 | M2W498 | M2XHD6 | AAA-type ATPase; Belongs to the AAA ATPase family. | Brix domain-containing protein. | 0.593 |
Gasu_20430 | Gasu_41030 | M2W498 | M2WWN4 | AAA-type ATPase; Belongs to the AAA ATPase family. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.594 |
Gasu_20430 | Gasu_41650 | M2W498 | M2XXG7 | AAA-type ATPase; Belongs to the AAA ATPase family. | ATP-dependent RNA helicase. | 0.718 |
Gasu_20430 | Gasu_43460 | M2W498 | M2VY02 | AAA-type ATPase; Belongs to the AAA ATPase family. | Ubiquitin fusion degradation protein. | 0.628 |
Gasu_20430 | Gasu_45790 | M2W498 | M2XD96 | AAA-type ATPase; Belongs to the AAA ATPase family. | ATP-dependent RNA helicase. | 0.660 |
Gasu_20430 | Gasu_53760 | M2W498 | M2WT19 | AAA-type ATPase; Belongs to the AAA ATPase family. | NOC3p domain-containing protein. | 0.604 |
Gasu_20430 | Gasu_53780 | M2W498 | M2XTQ1 | AAA-type ATPase; Belongs to the AAA ATPase family. | UBX domain-containing protein. | 0.960 |
Gasu_20430 | Gasu_55040 | M2W498 | M2XU44 | AAA-type ATPase; Belongs to the AAA ATPase family. | MI domain-containing protein. | 0.657 |
Gasu_31320 | Gasu_20430 | M2XHD6 | M2W498 | Brix domain-containing protein. | AAA-type ATPase; Belongs to the AAA ATPase family. | 0.593 |
Gasu_31320 | Gasu_41030 | M2XHD6 | M2WWN4 | Brix domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.998 |
Gasu_31320 | Gasu_41650 | M2XHD6 | M2XXG7 | Brix domain-containing protein. | ATP-dependent RNA helicase. | 0.947 |
Gasu_31320 | Gasu_45790 | M2XHD6 | M2XD96 | Brix domain-containing protein. | ATP-dependent RNA helicase. | 0.989 |
Gasu_31320 | Gasu_53760 | M2XHD6 | M2WT19 | Brix domain-containing protein. | NOC3p domain-containing protein. | 0.987 |
Gasu_31320 | Gasu_55040 | M2XHD6 | M2XU44 | Brix domain-containing protein. | MI domain-containing protein. | 0.414 |
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