STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_18330Transducin family protein / WD-40 repeat family protein. (583 aa)    
Predicted Functional Partners:
Gasu_29630
E3 ubiquitin ligase SCF complex SKP1 subunit; Belongs to the SKP1 family.
    
 0.935
Gasu_48170
RING-box protein 1.
    
 0.902
Gasu_10140
Ubiquitin.
    
  0.718
Gasu_50180
Ubiquitin-protein ligase (Cullin); Belongs to the cullin family.
    
 0.718
Gasu_29380
Ubiquitin-protein ligase (Cullin) isoform 2; Belongs to the cullin family.
    
 0.718
Gasu_27910
Ubiquitin-protein ligase (Cullin); Belongs to the cullin family.
    
 0.718
Gasu_31280
E3 ubiquitin-protein ligase TRIP12.
   
 0.710
Gasu_49700
50S ribosomal protein L2 (Plastid).
    
 0.660
Gasu_40380
[pt] 50S ribosomal protein L2 (Plastid).
    
 0.660
Gasu_17740
PI3K/PI4K domain-containing protein.
    
 0.626
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.