STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_18840DNA mismatch repair protein MutS2. (902 aa)    
Predicted Functional Partners:
Gasu_26000
Anthranilate synthase component II.
      
 0.600
Gasu_33750
Indole-3-glycerol phosphate synthase.
      
 0.600
Gasu_23340
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
     
 0.576
Gasu_10060
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
     
 0.568
Gasu_25830
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
     
 0.559
Gasu_17190
DNA polymerase I.
     
 0.558
Gasu_35360
Ribosomal protein L20 family protein.
   
   0.552
Gasu_48760
DNA helicase II / ATP-dependent DNA helicase PcrA.
  
  
 0.527
Gasu_50320
Ribosomal protein L28 family protein isoform 1.
   
 
 0.523
Gasu_18490
7,8-dihydro-8-oxoguanine triphosphatase; Belongs to the Nudix hydrolase family.
     
 0.518
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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