STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_15200tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (596 aa)    
Predicted Functional Partners:
Gasu_33090
Polyribonucleotide nucleotidyltransferase.
  
 
 0.628
Gasu_50820
Polyribonucleotide nucleotidyltransferase.
  
 
 0.628
Gasu_04180
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
      0.627
Gasu_59950
Ribonuclease III.
  
  
 0.588
Gasu_47570
F-type H+-transporting ATPase subunit delta.
     
 0.576
Gasu_09660
Pantoate--beta-alanine ligase isoform 2.
     
 0.571
Gasu_18010
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
  
 
 0.568
dnaB
Replicative DNA helicase.
  
  
 0.552
Gasu_04210
tRNA pseudouridine synthase D.
   
  
 0.536
Gasu_35420
RNA polymerase primary sigma factor.
     
 0.519
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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