STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_15370ATP-dependent RNA helicase isoform 1. (434 aa)    
Predicted Functional Partners:
Gasu_13710
Nucleolar protein pescadillo.
   
 0.720
Gasu_39490
Box C/D snoRNP component Nop58.
  
 
 0.645
Gasu_41650
ATP-dependent RNA helicase.
   
 0.645
Gasu_57600
rRNA processing protein-related protein isoform 1.
   
 0.634
Gasu_58920
Eukaryotic translation initiation factor eIF-4A; Belongs to the DEAD box helicase family.
  
0.626
Gasu_27780
Uncharacterized protein.
   
 0.609
Gasu_23020
Protein arginine N-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
   
  0.609
Gasu_09030
Transducin family protein / WD-40 repeat family protein.
   
 0.595
Gasu_46380
Splicing factor 3B subunit 1.
   
 0.592
Gasu_22500
Pre-mRNA-splicing factor ATP-dependent RNA helicase.
   
 0.588
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.