STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_14040Transducin family protein / WD-40 repeat family protein. (713 aa)    
Predicted Functional Partners:
Gasu_15950
DNA damage-binding protein 1 isoform 2.
    
 0.885
Gasu_56970
Ubiquitin-protein ligase (Cullin); Belongs to the cullin family.
   
 0.754
Gasu_48170
RING-box protein 1.
    
 0.627
Gasu_19400
TIP120 domain-containing protein.
   
 
 0.615
Gasu_53610
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.594
Gasu_43570
NEDD8-activating enzyme E1 regulatory subunit.
   
 
 0.584
Gasu_48770
Ubiquitin-activating enzyme E1 C.
     
 0.580
Gasu_55670
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
     
 0.580
Gasu_51510
DNA damage-binding protein 2.
    
 0.533
Gasu_37810
Transducin family protein / WD-40 repeat family protein.
    
 0.533
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.