Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gasu_03500 | Gasu_12190 | M2X7Q9 | M2W6V9 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | Archease. | 0.900 |
Gasu_03500 | Gasu_17500 | M2X7Q9 | M2Y4U2 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | DEAD box ATP-dependent RNA helicase, putative. | 0.874 |
Gasu_03500 | Gasu_29310 | M2X7Q9 | M2X054 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | RNA 3'-terminal phosphate cyclase-like protein. | 0.900 |
Gasu_03500 | Gasu_30900 | M2X7Q9 | M2W1C2 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | Uncharacterized protein. | 0.875 |
Gasu_03500 | Gasu_36620 | M2X7Q9 | M2WXY8 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | Peptide chain release factor eRF subunit 1. | 0.640 |
Gasu_12190 | Gasu_03500 | M2W6V9 | M2X7Q9 | Archease. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.900 |
Gasu_12190 | Gasu_17500 | M2W6V9 | M2Y4U2 | Archease. | DEAD box ATP-dependent RNA helicase, putative. | 0.633 |
Gasu_12190 | Gasu_29310 | M2W6V9 | M2X054 | Archease. | RNA 3'-terminal phosphate cyclase-like protein. | 0.474 |
Gasu_12190 | Gasu_30900 | M2W6V9 | M2W1C2 | Archease. | Uncharacterized protein. | 0.442 |
Gasu_12190 | Gasu_36620 | M2W6V9 | M2WXY8 | Archease. | Peptide chain release factor eRF subunit 1. | 0.697 |
Gasu_12190 | Gasu_53530 | M2W6V9 | M2XTM4 | Archease. | tRNA (guanine(26)-N(2))-dimethyltransferase. | 0.454 |
Gasu_17500 | Gasu_03500 | M2Y4U2 | M2X7Q9 | DEAD box ATP-dependent RNA helicase, putative. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.874 |
Gasu_17500 | Gasu_12190 | M2Y4U2 | M2W6V9 | DEAD box ATP-dependent RNA helicase, putative. | Archease. | 0.633 |
Gasu_17500 | Gasu_30900 | M2Y4U2 | M2W1C2 | DEAD box ATP-dependent RNA helicase, putative. | Uncharacterized protein. | 0.921 |
Gasu_29310 | Gasu_03500 | M2X054 | M2X7Q9 | RNA 3'-terminal phosphate cyclase-like protein. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.900 |
Gasu_29310 | Gasu_12190 | M2X054 | M2W6V9 | RNA 3'-terminal phosphate cyclase-like protein. | Archease. | 0.474 |
Gasu_29310 | Gasu_53530 | M2X054 | M2XTM4 | RNA 3'-terminal phosphate cyclase-like protein. | tRNA (guanine(26)-N(2))-dimethyltransferase. | 0.440 |
Gasu_30900 | Gasu_03500 | M2W1C2 | M2X7Q9 | Uncharacterized protein. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.875 |
Gasu_30900 | Gasu_12190 | M2W1C2 | M2W6V9 | Uncharacterized protein. | Archease. | 0.442 |
Gasu_30900 | Gasu_17500 | M2W1C2 | M2Y4U2 | Uncharacterized protein. | DEAD box ATP-dependent RNA helicase, putative. | 0.921 |
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