STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_0720040S ribosomal protein S9e; Belongs to the universal ribosomal protein uS4 family. (193 aa)    
Predicted Functional Partners:
Gasu_29040
60S ribosomal protein L21e.
 
 
 0.997
Gasu_16370
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 0.989
Gasu_52570
40S ribosomal protein S13e; Belongs to the universal ribosomal protein uS15 family.
  
 0.989
Gasu_18810
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.989
Gasu_61400
40S ribosomal protein S11e; Belongs to the universal ribosomal protein uS17 family.
  
 0.989
Gasu_58960
40S ribosomal protein S2e.
  
 0.989
Gasu_49340
40S ribosomal protein S15e; Belongs to the universal ribosomal protein uS19 family.
  
 0.989
Gasu_36510
40S ribosomal protein S3e; Belongs to the universal ribosomal protein uS3 family.
  
 0.989
Gasu_20930
40S ribosomal protein S19e.
   
 0.989
Gasu_13470
40S ribosomal protein S14e; Belongs to the universal ribosomal protein uS11 family.
  
 0.989
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.