STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_07280WD_REPEATS_REGION domain-containing protein. (1483 aa)    
Predicted Functional Partners:
Gasu_26230
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.999
Gasu_27720
Transducin family protein / WD-40 repeat family protein; Belongs to the WD repeat SEC13 family.
    
 0.999
Gasu_00480
Protein transport protein Sec24-like protein.
   
 0.998
Gasu_19570
ADP-ribosylation factor isoform 1; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.997
Gasu_26520
Protein transport protein Sec24-like protein isoform 1.
   
 0.994
Gasu_35950
Sec16_C domain-containing protein.
   
 0.929
Gasu_47830
Vesicle transport protein SEC22; Belongs to the synaptobrevin family.
    
 0.914
Gasu_45450
Syntaxin 5 isoform 2; Belongs to the syntaxin family.
     
 0.890
Gasu_28800
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
     
 0.838
Gasu_38430
Golgi SNAP receptor complex member 2.
     
 0.831
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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