Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gasu_01970 | Gasu_03150 | M2YAF1 | M2W9H3 | S-adenosylmethionine decarboxylase isoform 1. | Spermidine synthase. | 0.975 |
Gasu_01970 | Gasu_16050 | M2YAF1 | M2X3V2 | S-adenosylmethionine decarboxylase isoform 1. | 1-aminocyclopropane-1-carboxylate synthase. | 0.927 |
Gasu_01970 | Gasu_30450 | M2YAF1 | M2W1Q3 | S-adenosylmethionine decarboxylase isoform 1. | Spermine oxidase. | 0.483 |
Gasu_01970 | Gasu_54820 | M2YAF1 | M2WSS2 | S-adenosylmethionine decarboxylase isoform 1. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.410 |
Gasu_01970 | Gasu_60030 | M2YAF1 | M2WRF9 | S-adenosylmethionine decarboxylase isoform 1. | Spermidine synthase; Belongs to the spermidine/spermine synthase family. | 0.975 |
Gasu_03150 | Gasu_01970 | M2W9H3 | M2YAF1 | Spermidine synthase. | S-adenosylmethionine decarboxylase isoform 1. | 0.975 |
Gasu_03150 | Gasu_16050 | M2W9H3 | M2X3V2 | Spermidine synthase. | 1-aminocyclopropane-1-carboxylate synthase. | 0.906 |
Gasu_03150 | Gasu_24360 | M2W9H3 | M2Y2X1 | Spermidine synthase. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.922 |
Gasu_03150 | Gasu_26000 | M2W9H3 | M2XIT4 | Spermidine synthase. | Anthranilate synthase component II. | 0.465 |
Gasu_03150 | Gasu_30450 | M2W9H3 | M2W1Q3 | Spermidine synthase. | Spermine oxidase. | 0.926 |
Gasu_03150 | Gasu_33750 | M2W9H3 | M2XZW5 | Spermidine synthase. | Indole-3-glycerol phosphate synthase. | 0.465 |
Gasu_03150 | Gasu_36490 | M2W9H3 | M2VZY2 | Spermidine synthase. | N-carbamoylputrescine amidase. | 0.921 |
Gasu_03150 | Gasu_48290 | M2W9H3 | M2XVK7 | Spermidine synthase. | Bifunctional lysine-ketoglutarate reductase / saccharopine dehyrdogenase. | 0.628 |
Gasu_03150 | Gasu_54820 | M2W9H3 | M2WSS2 | Spermidine synthase. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.922 |
Gasu_03150 | Gasu_60030 | M2W9H3 | M2WRF9 | Spermidine synthase. | Spermidine synthase; Belongs to the spermidine/spermine synthase family. | 0.900 |
Gasu_16050 | Gasu_01970 | M2X3V2 | M2YAF1 | 1-aminocyclopropane-1-carboxylate synthase. | S-adenosylmethionine decarboxylase isoform 1. | 0.927 |
Gasu_16050 | Gasu_03150 | M2X3V2 | M2W9H3 | 1-aminocyclopropane-1-carboxylate synthase. | Spermidine synthase. | 0.906 |
Gasu_16050 | Gasu_26000 | M2X3V2 | M2XIT4 | 1-aminocyclopropane-1-carboxylate synthase. | Anthranilate synthase component II. | 0.673 |
Gasu_16050 | Gasu_33750 | M2X3V2 | M2XZW5 | 1-aminocyclopropane-1-carboxylate synthase. | Indole-3-glycerol phosphate synthase. | 0.673 |
Gasu_16050 | Gasu_60030 | M2X3V2 | M2WRF9 | 1-aminocyclopropane-1-carboxylate synthase. | Spermidine synthase; Belongs to the spermidine/spermine synthase family. | 0.906 |
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