STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_03460Uncharacterized protein. (114 aa)    
Predicted Functional Partners:
Gasu_22490
Uncharacterized protein.
    
 
 0.864
Gasu_55610
Translocation protein, Sec family; Belongs to the SecY/SEC61-alpha family.
    
 
 0.680
Gasu_45880
Uncharacterized protein.
   
   0.676
Gasu_60120
Uncharacterized protein.
   
 
 0.654
Gasu_19310
Protein transport protein SEC61 subunit gamma.
   
   0.631
Gasu_19380
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.618
Gasu_46480
60S ribosomal protein L18e.
    
   0.612
Gasu_43860
60S ribosomal protein L35Ae isoform 1.
    
   0.612
Gasu_12760
60S ribosomal protein L4.
    
   0.612
Gasu_07620
60S ribosomal protein L35.
    
   0.612
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.