STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_01510Bifunctional 3-hydroquinate dehydratase/shikimate 5-dehydrogenase. (521 aa)    
Predicted Functional Partners:
Gasu_30570
3-dehydroquinate synthase.
 
   
  0.947
Gasu_49560
Shikimate kinase.
  
 
 0.923
Gasu_30830
Shikimate kinase.
  
 
 0.923
Gasu_04180
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
 
     0.920
Gasu_26000
Anthranilate synthase component II.
  
 
 0.802
Gasu_33750
Indole-3-glycerol phosphate synthase.
  
 
 0.802
Gasu_21930
Chorismate synthase.
  
 0.671
Gasu_23330
Nicotinamide-nucleotide adenylyltransferase.
  
  
 0.613
Gasu_03410
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
  
 0.601
Gasu_02740
Shikimate kinase family protein.
     
  0.499
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.