STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gasu_01600Ubiquitin-specific protease; Belongs to the peptidase C19 family. (389 aa)    
Predicted Functional Partners:
Gasu_56790
Transcription initiation factor TFIID subunit D8.
    
 0.845
Gasu_35830
Histone acetyltransferase.
    
 0.844
Gasu_29460
Transcription initiation factor TFIID subunit D7.
    
 0.841
Gasu_01950
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.839
Gasu_16910
Transcription initiation factor TFIID subunit D4.
    
 0.777
Gasu_45830
SGF29 C-terminal domain-containing protein.
   
 0.773
Gasu_10140
Ubiquitin.
    
  0.772
Gasu_19330
Transcription initiation factor TFIID subunit D1.
    
 0.736
Gasu_39910
Transcription initiation factor TFIID subunit D5.
    
 0.731
Gasu_39290
Transcriptional adapter.
    
 0.708
Your Current Organism:
Galdieria sulphuraria
NCBI taxonomy Id: 130081
Other names: G. sulphuraria, SAG 17.91
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.